Thalassomonas actiniarum strain A5K-106

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Colwelliaceae

Genus

Thalassomonas

Description

Thalassomonas actiniarum strain A5K-106 is characterized by having two replicons, which is indicative of its genetic complexity and adaptability. The strain is cataloged in two specific GenBank accessions: NZ_CP059736.1 and NZ_CP059735.1. These accessions provide a framework for understanding its genetic makeup and potential functions within its ecological niche. As a member of the Thalassomonas genus, T. actiniarum is likely adapted to marine environments, reflecting the ecological roles such microorganisms play in oceanic ecosystems. The two replicons may offer advantages such as enhanced gene regulation and stability, which can be beneficial in fluctuating marine conditions. This genetic versatility allows for a range of metabolic processes, enabling the strain to thrive in diverse environments. The presence of two replicons in T. actiniarum strain A5K-106 suggests a potential for varied responses to environmental changes, including nutrient availability and competition with other microbial communities. Understanding the genetic architecture of this strain can provide insights into its ecological roles, including its contributions to biogeochemical cycles and interactions within marine microbiomes. Overall, the genomic information linked to the strain underscores its importance in marine microbiology and its potential applications in understanding marine ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyColwelliaceae
GenusThalassomonas
SpeciesThalassomonas actiniarum
Strainstrain A5K-106

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thalassomonas actiniarum strain A5K-106 chromosome, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
arac family transcriptional regulatorSG35_RS21375Not AvailablePositive4890664 - 489153032653.6
multidrug effflux mfs transporterSG35_RS21380Not AvailableNegative4891527 - 489272943136.2
dj-1/pfpi family proteinSG35_RS21385Not AvailableNegative4892947 - 489353421224.5
hypothetical proteinSG35_RS21390Not AvailablePositive4893744 - 48939929764.88
abc transporter atp-binding proteinSG35_RS21395Not AvailableNegative4894063 - 489496233223.9
hypothetical proteinSG35_RS21400Not AvailableNegative4894959 - 489578030424.9
ggdef domain-containing proteinSG35_RS21405Not AvailableNegative4895935 - 489722748635.7
mechanosensitive ion channel family proteinSG35_RS21410Not AvailableNegative4897338 - 489823132483.9
retropepsin-like aspartic proteaseSG35_RS21415Not AvailablePositive4898600 - 489982946132.9
ygjp-like metallopeptidase domain-containing proteinSG35_RS21420Not AvailablePositive4899910 - 490041619673.0

Displaying genes 4321 – 4330 of 6405 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.