Halorubrum sp. CBA1229

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halorubrum

Description

Halorubrum sp. CBA1229 is a rod-shaped archaeon characterized by the presence of flagella, which facilitates motility in its environment. This organism is notable for having two replicons, which suggests a complex genetic organization that may contribute to its adaptability and survival in extreme conditions. The specific accession numbers associated with Halorubrum sp. CBA1229, NZ_CP054585.1 and NZ_CP054586.1, provide a means for further genetic and genomic analysis. These accessions indicate that the organism has been sequenced and its genomic data is available for study, which can enhance our understanding of its metabolic pathways and ecological role. In terms of ecological insight, the presence of flagella in Halorubrum sp. CBA1229 may indicate an ability to navigate through saline environments, typical for members of the Halorubrum genus, which are often found in hypersaline habitats. The rod shape may also contribute to its efficiency in nutrient uptake and movement within these environments. Understanding the traits of Halorubrum sp. CBA1229 can provide valuable information on microbial diversity and adaptation mechanisms in extreme saline conditions.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalorubrum
SpeciesHalorubrum sp. CBA1229
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorubrum sp. CBA1229 plasmid pCBA1229, complete sequence.

Gene Summary

Adenine Count

76787 bp

Thymine Count

74899 bp

Guanine Count

106611 bp

Cytosine Count

105641 bp

Genome Length

363938 bp

Protein-coding Genes

389 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
heavy metal translocating p-type atpaseHrr1229_RS16555Not AvailableNegative74881 - 7738288068.8
helix-turn-helix domain-containing proteinHrr1229_RS16560Not AvailableNegative77626 - 778568820.69
plastocyanin/azurin family copper-binding proteinHrr1229_RS16565Not AvailablePositive77976 - 7856020118.9
disulfide bond formation protein bHrr1229_RS16570Not AvailableNegative79036 - 7945214661.2
thioredoxin domain-containing proteinHrr1229_RS16575Not AvailableNegative79460 - 8044634693.5
cox15/ctaa family proteinHrr1229_RS16580Not AvailableNegative80550 - 8106518732.3
transcription initiation factor iibHrr1229_RS16585Not AvailablePositive81236 - 8219836149.2
winged helix-turn-helix domain-containing proteinHrr1229_RS16590Not AvailablePositive82378 - 8275514181.7
hypothetical proteinHrr1229_RS18300Not AvailablePositive82752 - 830309661.25
cbb3-type cytochrome c oxidase subunit iHrr1229_RS16595Not AvailableNegative83343 - 8584193046.9

Displaying genes 81 – 90 of 3634 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.