Rhizobium indicum strain JKLM 12A2

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium indicum strain JKLM 12A2 is a rod-shaped bacterium characterized by the presence of flagella, which likely aids in its motility. This strain is notable for having a complex genomic structure, consisting of four replicons, indicating a potentially intricate regulatory and functional capacity within its genetic makeup. The strain is documented under multiple accessions: NZ_CP054021.1, NZ_CP054022.1, NZ_CP054024.1, and NZ_CP054025.1, which provide a wealth of genomic information for further study and characterization. These accessions represent distinct sequences that contribute to understanding the genetic diversity and adaptability of R. indicum strain JKLM 12A2. In terms of ecological implications, members of the Rhizobium genus are well-known for their symbiotic relationships with legumes, facilitating nitrogen fixation in the soil. The rod shape and flagellated nature of R. indicum strain JKLM 12A2 suggest a capability for efficient movement toward host plants, promoting beneficial interactions in agricultural ecosystems. This trait may enhance its effectiveness in improving soil fertility and supporting plant growth through nitrogen assimilation. Understanding the specific traits of R. indicum strain JKLM 12A2 can inform agricultural practices aimed at sustainable crop production and soil health management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium indicum
Strainstrain JKLM 12A2

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhizobium indicum strain JKLM 12A2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhizobium indicum strain JKLM 12A2 plasmid pPR12A204, complete

Gene Summary

Adenine Count

63497 bp

Thymine Count

60863 bp

Guanine Count

93802 bp

Cytosine Count

95336 bp

Genome Length

313498 bp

Protein-coding Genes

293 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rhomboid family intramembrane serine proteaseFFM53_RS15460Not AvailableNegative3155282 - 315606728234.1
cob(i)yrinic acid a,c-diamide adenosyltransferaseFFM53_RS15465Not AvailableNegative3156101 - 315667920921.0
twin transmembrane helix small proteinFFM53_RS15470Not AvailableNegative3156914 - 31571177284.57
sdr family oxidoreductaseFFM53_RS15475Not AvailableNegative3157136 - 315796930432.7
yihy/virulence factor brkb family proteinFFM53_RS15480Not AvailablePositive3158046 - 315896934080.4
trna glutamyl-q(34) synthetase gluqrsFFM53_RS15485Not AvailableNegative3158934 - 315981532822.9
dna-3-methyladenine glycosylase family proteinFFM53_RS15490Not AvailablePositive3159814 - 316050624661.9
hnh endonucleaseFFM53_RS15495Not AvailablePositive3160618 - 316117521255.2
disulfide bond formation protein bFFM53_RS15500Not AvailableNegative3161246 - 316176117755.1
yqaa family proteinFFM53_RS15505Not AvailableNegative3161840 - 316243021930.4

Displaying genes 3771 – 3780 of 6604 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.