Rhizobium indicum strain JKLM 12A2

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium indicum strain JKLM 12A2 is a rod-shaped bacterium characterized by the presence of flagella, which likely aids in its motility. This strain is notable for having a complex genomic structure, consisting of four replicons, indicating a potentially intricate regulatory and functional capacity within its genetic makeup. The strain is documented under multiple accessions: NZ_CP054021.1, NZ_CP054022.1, NZ_CP054024.1, and NZ_CP054025.1, which provide a wealth of genomic information for further study and characterization. These accessions represent distinct sequences that contribute to understanding the genetic diversity and adaptability of R. indicum strain JKLM 12A2. In terms of ecological implications, members of the Rhizobium genus are well-known for their symbiotic relationships with legumes, facilitating nitrogen fixation in the soil. The rod shape and flagellated nature of R. indicum strain JKLM 12A2 suggest a capability for efficient movement toward host plants, promoting beneficial interactions in agricultural ecosystems. This trait may enhance its effectiveness in improving soil fertility and supporting plant growth through nitrogen assimilation. Understanding the specific traits of R. indicum strain JKLM 12A2 can inform agricultural practices aimed at sustainable crop production and soil health management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium indicum
Strainstrain JKLM 12A2

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhizobium indicum strain JKLM 12A2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhizobium indicum strain JKLM 12A2 plasmid pPR12A204, complete

Gene Summary

Adenine Count

63497 bp

Thymine Count

60863 bp

Guanine Count

93802 bp

Cytosine Count

95336 bp

Genome Length

313498 bp

Protein-coding Genes

293 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ligase-associated dna damage response endonuclease pdemFFM53_RS10290Not AvailableNegative2075744 - 207648126625.5
ligase-associated dna damage response dexh box helicaseFFM53_RS10295Not AvailableNegative2076559 - 207906992902.0
yitt family proteinFFM53_RS10300Not AvailableNegative2079222 - 207985421953.2
rrf2 family transcriptional regulatorFFM53_RS10305Not AvailablePositive2079988 - 208048817369.1
carboxymuconolactone decarboxylase family proteinFFM53_RS10310Not AvailablePositive2080511 - 208097217192.5
hypothetical proteinFFM53_RS10315Not AvailableNegative2081041 - 20812086325.45
yitt family proteinFFM53_RS10320Not AvailableNegative2081362 - 208199722614.2
class i sam-dependent dna methyltransferaseFFM53_RS10325Not AvailableNegative2082210 - 208314233427.8
duf6460 domain-containing proteinFFM53_RS10330Not AvailablePositive2083344 - 208361010014.6
cap domain-containing proteinFFM53_RS10335Not AvailablePositive2083612 - 208410917038.6

Displaying genes 2731 – 2740 of 6604 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.