Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent protease atp-binding subunit clpx | CWC22_RS04630 | Not Available | Positive | 1025623 - 1026906 | 47033.1 |
| endopeptidase la | CWC22_RS04635 | Not Available | Positive | 1027090 - 1029453 | 87703.4 |
| nucleoid-associated protein hu-beta | CWC22_RS04640 | Not Available | Positive | 1029678 - 1029950 | 9190.85 |
| sura n-terminal domain-containing protein | CWC22_RS04645 | Not Available | Positive | 1030281 - 1032194 | 70890.2 |
| hypothetical protein | CWC22_RS04650 | Not Available | Positive | 1033025 - 1033171 | 5135.36 |
| hypothetical protein | CWC22_RS04655 | Not Available | Positive | 1034655 - 1034801 | 5400.65 |
| hypothetical protein | CWC22_RS04660 | Not Available | Positive | 1034837 - 1035391 | 20484.7 |
| helix-turn-helix transcriptional regulator | CWC22_RS24590 | Not Available | Positive | 1036523 - 1037200 | 25587.8 |
| winged helix-turn-helix domain-containing protein | CWC22_RS04670 | Not Available | Negative | 1037278 - 1039413 | 80614.6 |
| hypothetical protein | CWC22_RS04675 | Not Available | Negative | 1039823 - 1040917 | 41602.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
