Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| substrate-binding periplasmic protein | CWC22_RS04580 | Not Available | Negative | 1019740 - 1020570 | 31036.6 |
| fha domain-containing protein | CWC22_RS04585 | Not Available | Positive | 1020805 - 1021110 | 11455.6 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | CWC22_RS04590 | Not Available | Negative | 1021180 - 1022034 | 30488.9 |
| Trna-pro | Not Available | Not Available | Positive | 1022429 - 1022505 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 1022576 - 1022652 | Not Available |
| Trna-his | Not Available | Not Available | Positive | 1022676 - 1022751 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 1022771 - 1022847 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 1022867 - 1022943 | Not Available |
| trigger factor | CWC22_RS04620 | Not Available | Positive | 1023275 - 1024582 | 47980.0 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | CWC22_RS04625 | Not Available | Positive | 1024862 - 1025479 | 22670.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
