Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | Positive | 945297 - 945381 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 945421 - 945497 | Not Available |
| redox-regulated atpase ychf | CWC22_RS04190 | Not Available | Negative | 945742 - 946833 | 39425.0 |
| aminoacyl-trna hydrolase | CWC22_RS04195 | Not Available | Negative | 946951 - 947535 | 21298.9 |
| 50s ribosomal protein l25/general stress protein ctc | CWC22_RS04200 | Not Available | Negative | 947555 - 948163 | 21741.8 |
| ribose-phosphate pyrophosphokinase | CWC22_RS04205 | Not Available | Negative | 948363 - 949310 | 34377.4 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | CWC22_RS04210 | Not Available | Negative | 949389 - 950246 | 31445.8 |
| lipoprotein insertase outer membrane protein lolb | CWC22_RS04215 | Not Available | Negative | 950243 - 950830 | 23004.0 |
| glutamyl-trna reductase | CWC22_RS04220 | Not Available | Positive | 950914 - 952170 | 46208.3 |
| peptide chain release factor 1 | CWC22_RS04225 | Not Available | Positive | 952178 - 953263 | 40344.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
