Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | CWC22_RS03830 | Not Available | Positive | 860277 - 861344 | 37537.5 |
| adenosylcobinamide-gdp ribazoletransferase | CWC22_RS03835 | Not Available | Positive | 861337 - 862113 | 27913.6 |
| bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | CWC22_RS03840 | Not Available | Positive | 862110 - 862649 | 19775.7 |
| cobyric acid synthase | CWC22_RS03845 | Not Available | Positive | 862652 - 864133 | 53372.8 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | CWC22_RS03850 | Not Available | Positive | 864130 - 864729 | 22286.4 |
| cobalamin-binding protein | CWC22_RS03855 | Not Available | Positive | 864729 - 865607 | 32433.0 |
| uracil-dna glycosylase | CWC22_RS03860 | Not Available | Positive | 865610 - 866269 | 24851.5 |
| duf3545 family protein | CWC22_RS03865 | Not Available | Negative | 866315 - 866506 | 7439.83 |
| transaldolase | CWC22_RS03870 | Not Available | Negative | 866815 - 867765 | 34767.3 |
| peroxide stress protein yaaa | CWC22_RS03875 | Not Available | Positive | 868067 - 868846 | 28955.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
