Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CWC22_RS03730 | Not Available | Negative | 842938 - 843114 | 6701.76 |
| helix-turn-helix domain-containing protein | CWC22_RS03735 | Not Available | Positive | 843454 - 843699 | 9421.42 |
| ampg family muropeptide mfs transporter | CWC22_RS03740 | Not Available | Negative | 843790 - 845172 | 50946.5 |
| peptidylprolyl isomerase | CWC22_RS03745 | Not Available | Negative | 845229 - 845855 | 23807.3 |
| yajg family lipoprotein | CWC22_RS03750 | Not Available | Negative | 845867 - 846430 | 20517.7 |
| methyltransferase | CWC22_RS03755 | Not Available | Negative | 846433 - 847596 | 42891.5 |
| alpha-ketoglutarate-dependent dioxygenase alkb family protein | CWC22_RS03760 | Not Available | Positive | 847682 - 848284 | 22471.9 |
| bola family protein | CWC22_RS03765 | Not Available | Positive | 848340 - 848657 | 11874.0 |
| enoyl-acp reductase fabv | CWC22_RS03770 | Not Available | Positive | 848730 - 849920 | 43184.9 |
| na(+)-translocating nadh-quinone reductase subunit a | CWC22_RS03775 | Not Available | Positive | 850302 - 851645 | 48064.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
