Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | CWC22_RS00140 | Not Available | Negative | 30793 - 32400 | 58997.7 |
| group ii truncated hemoglobin | CWC22_RS00145 | Not Available | Negative | 32504 - 32965 | 17810.3 |
| shikimate dehydrogenase | CWC22_RS00150 | Not Available | Positive | 32995 - 33816 | 28721.1 |
| duf1488 domain-containing protein | CWC22_RS00155 | Not Available | Positive | 33813 - 34052 | 9052.79 |
| gamma carbonic anhydrase family protein | CWC22_RS00160 | Not Available | Negative | 34038 - 34586 | 19683.6 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 35208 - 36740 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 37011 - 39890 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 40006 - 40120 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 41848 - 43380 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 43650 - 46529 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
