Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase | CWC22_RS03680 | Not Available | Positive | 829946 - 831181 | 46398.9 |
| p-ii family nitrogen regulator | CWC22_RS03685 | Not Available | Positive | 831374 - 831712 | 12598.3 |
| ammonium transporter | CWC22_RS03690 | Not Available | Positive | 831724 - 832953 | 43279.4 |
| penicillin-binding protein 1b | CWC22_RS03695 | Not Available | Positive | 833060 - 835402 | 88134.8 |
| methyl-accepting chemotaxis protein | CWC22_RS03700 | Not Available | Negative | 835426 - 837264 | 66809.5 |
| glutamate-1-semialdehyde 2,1-aminomutase | CWC22_RS03705 | Not Available | Negative | 837404 - 838690 | 45724.7 |
| aspartate carbamoyltransferase | CWC22_RS03710 | Not Available | Negative | 838767 - 839783 | 37523.6 |
| copd family protein | CWC22_RS03715 | Not Available | Negative | 839955 - 840389 | 17363.0 |
| chloride channel protein | CWC22_RS03720 | Not Available | Negative | 840418 - 842100 | 60730.6 |
| iron-sulfur cluster insertion protein erpa | CWC22_RS03725 | Not Available | Positive | 842440 - 842778 | 12091.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
