Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ydbl family protein | CWC22_RS03480 | Not Available | Positive | 793899 - 794219 | 11292.9 |
| duf1415 domain-containing protein | CWC22_RS03485 | Not Available | Negative | 794250 - 794795 | 20634.1 |
| lipid iv(a) 3-deoxy-d-manno-octulosonic acid transferase | CWC22_RS03490 | Not Available | Negative | 794796 - 796067 | 46846.2 |
| capsule assembly wzi family protein | CWC22_RS03495 | Not Available | Positive | 796215 - 797663 | 54891.4 |
| sis domain-containing protein | CWC22_RS03500 | Not Available | Positive | 797753 - 798346 | 21333.5 |
| bifunctional d-glycero-beta-d-manno-heptose-7-phosphate kinase/d-glycero-beta-d-manno-heptose 1-phosphate adenylyltransferase hlde | CWC22_RS03505 | Not Available | Positive | 798343 - 799785 | 51630.8 |
| 3-deoxy-d-manno-octulosonic acid kinase | CWC22_RS03510 | Not Available | Negative | 799816 - 800550 | 27796.3 |
| glycosyltransferase family 9 protein | CWC22_RS03515 | Not Available | Positive | 800685 - 801728 | 37930.3 |
| d-glycero-beta-d-manno-heptose 1,7-bisphosphate 7-phosphatase | CWC22_RS03520 | Not Available | Positive | 801725 - 802282 | 20693.6 |
| glycine c-acetyltransferase | CWC22_RS03525 | Not Available | Positive | 802455 - 803651 | 43031.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
