Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter permease subunit | CWC22_RS03230 | Not Available | Positive | 734780 - 737929 | 114180.0 |
| trap transporter substrate-binding protein | CWC22_RS03235 | Not Available | Negative | 737935 - 739056 | 41386.9 |
| sensor histidine kinase | CWC22_RS03240 | Not Available | Positive | 739296 - 741107 | 68776.6 |
| duf885 domain-containing protein | CWC22_RS03245 | Not Available | Negative | 741125 - 742963 | 69746.6 |
| radical sam family heme chaperone hemw | CWC22_RS03250 | Not Available | Negative | 743095 - 744231 | 42532.5 |
| rdgb/ham1 family non-canonical purine ntp pyrophosphatase | CWC22_RS03255 | Not Available | Negative | 744228 - 744821 | 21321.2 |
| duf4426 domain-containing protein | CWC22_RS03260 | Not Available | Negative | 744823 - 745269 | 16612.8 |
| yggt family protein | CWC22_RS03265 | Not Available | Negative | 745288 - 745821 | 19484.1 |
| pyrroline-5-carboxylate reductase | CWC22_RS03270 | Not Available | Negative | 745832 - 746653 | 29278.2 |
| yggs family pyridoxal phosphate-dependent enzyme | CWC22_RS03275 | Not Available | Negative | 746669 - 747352 | 25810.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
