Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trk system potassium transporter trka | CWC22_RS00090 | Not Available | Negative | 21484 - 22860 | 50167.6 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | CWC22_RS00095 | Not Available | Negative | 22878 - 24161 | 47215.4 |
| methionyl-trna formyltransferase | CWC22_RS00100 | Not Available | Negative | 24161 - 25105 | 33782.4 |
| peptide deformylase | CWC22_RS00105 | Not Available | Negative | 25152 - 25661 | 19000.8 |
| lysm peptidoglycan-binding domain-containing protein | CWC22_RS00110 | Not Available | Positive | 25778 - 26899 | 41260.4 |
| dna-processing protein dpra | CWC22_RS00115 | Not Available | Positive | 26965 - 28044 | 39543.7 |
| duf494 family protein | CWC22_RS00120 | Not Available | Positive | 28047 - 28520 | 18219.8 |
| type i dna topoisomerase | CWC22_RS00125 | Not Available | Positive | 28661 - 29230 | 21221.3 |
| sua5/ycio/yrdc/ywlc family protein | CWC22_RS00130 | Not Available | Positive | 29227 - 29802 | 20648.5 |
| oxygen-dependent coproporphyrinogen oxidase | CWC22_RS00135 | Not Available | Positive | 29808 - 30737 | 35380.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
