Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional gnat family n-acetyltransferase/carbon-nitrogen hydrolase family protein | CWC22_RS03130 | Not Available | Positive | 710783 - 712342 | 58809.8 |
| hypothetical protein | CWC22_RS03135 | Not Available | Negative | 712432 - 712857 | 14815.5 |
| s8 family peptidase | CWC22_RS03140 | Not Available | Negative | 712869 - 714677 | 64736.0 |
| pas domain-containing hybrid sensor histidine kinase/response regulator | CWC22_RS03145 | Not Available | Positive | 714951 - 717359 | 89312.8 |
| valine--trna ligase | CWC22_RS03150 | Not Available | Negative | 717472 - 720318 | 108447.0 |
| dna polymerase iii subunit chi | CWC22_RS03155 | Not Available | Negative | 720342 - 720788 | 16701.9 |
| leucyl aminopeptidase | CWC22_RS03160 | Not Available | Negative | 720936 - 722447 | 54874.8 |
| lps export abc transporter permease lptf | CWC22_RS03165 | Not Available | Positive | 722679 - 723791 | 41226.9 |
| lps export abc transporter permease lptg | CWC22_RS03170 | Not Available | Positive | 723788 - 724858 | 39135.0 |
| rdd family protein | CWC22_RS03175 | Not Available | Negative | 724924 - 725421 | 18339.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
