Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family winged helix-turn-helix transcriptional regulator | CWC22_RS02980 | Not Available | Negative | 673875 - 674318 | 16778.5 |
| glutathione peroxidase | CWC22_RS02985 | Not Available | Negative | 674320 - 674802 | 17573.0 |
| lysr family transcriptional regulator | CWC22_RS02990 | Not Available | Negative | 674888 - 675757 | 32410.0 |
| iron-containing alcohol dehydrogenase | CWC22_RS02995 | Not Available | Positive | 675910 - 677064 | 41709.8 |
| cytochrome b/b6 domain-containing protein | CWC22_RS03000 | Not Available | Positive | 677194 - 677838 | 23312.2 |
| duf3581 family protein | CWC22_RS03005 | Not Available | Positive | 677974 - 678666 | 26176.3 |
| dcap family trimeric outer membrane transporter | CWC22_RS03010 | Not Available | Negative | 678904 - 680082 | 42670.6 |
| acetate--coa ligase | CWC22_RS03015 | Not Available | Positive | 680406 - 682343 | 71186.6 |
| response regulator transcription factor | CWC22_RS03020 | Not Available | Positive | 682430 - 683083 | 24212.0 |
| formyltetrahydrofolate deformylase | CWC22_RS03025 | Not Available | Negative | 683140 - 683970 | 30735.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
