Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lyse family transporter | CWC22_RS02780 | Not Available | Positive | 628741 - 629364 | 22482.8 |
| gamma-glutamylcyclotransferase family protein | CWC22_RS02785 | Not Available | Positive | 629382 - 629882 | 18695.2 |
| serine hydrolase | CWC22_RS02790 | Not Available | Positive | 629898 - 631475 | 58385.8 |
| histone deacetylase family protein | CWC22_RS02795 | Not Available | Positive | 631563 - 632480 | 33340.5 |
| duf4144 family protein | CWC22_RS02800 | Not Available | Negative | 632491 - 632784 | 10768.8 |
| eal domain-containing protein | CWC22_RS02805 | Not Available | Positive | 632861 - 635413 | 95707.0 |
| duf2797 domain-containing protein | CWC22_RS02810 | Not Available | Negative | 635429 - 636256 | 30665.2 |
| phosphoribosylamine--glycine ligase | CWC22_RS02815 | Not Available | Negative | 636373 - 637656 | 45319.9 |
| class i sam-dependent methyltransferase | CWC22_RS02820 | Not Available | Negative | 637672 - 638496 | 29908.4 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | CWC22_RS02825 | Not Available | Negative | 638600 - 640186 | 57220.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
