Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein translocase subunit secf | CWC22_RS02730 | Not Available | Positive | 618783 - 619724 | 33948.7 |
| hypothetical protein | CWC22_RS02735 | Not Available | Positive | 619791 - 620384 | 21164.2 |
| bifunctional diguanylate cyclase/phosphodiesterase | CWC22_RS02740 | Not Available | Positive | 620472 - 622259 | 66747.0 |
| substrate-binding periplasmic protein | CWC22_RS02745 | Not Available | Positive | 622388 - 623179 | 30021.6 |
| hypothetical protein | CWC22_RS02750 | Not Available | Negative | 623181 - 623804 | 23657.7 |
| hypothetical protein | CWC22_RS02755 | Not Available | Negative | 623872 - 624492 | 23624.8 |
| methyl-accepting chemotaxis protein | CWC22_RS02760 | Not Available | Negative | 624954 - 626585 | 58723.9 |
| pseudouridine synthase | CWC22_RS02765 | Not Available | Negative | 626712 - 627422 | 26690.1 |
| 5-carboxymethyl-2-hydroxymuconate delta-isomerase | CWC22_RS02770 | Not Available | Negative | 627505 - 627837 | 12424.8 |
| hypothetical protein | CWC22_RS02775 | Not Available | Positive | 627963 - 628760 | 29212.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
