Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfurtransferase tusa | CWC22_RS00040 | Not Available | Negative | 9899 - 10138 | 9100.09 |
| acetyl-coa c-acyltransferase fada | CWC22_RS00045 | Not Available | Negative | 10298 - 11467 | 40896.1 |
| fatty acid oxidation complex subunit alpha fadb | CWC22_RS00050 | Not Available | Negative | 11469 - 13631 | 78217.9 |
| lytic transglycosylase domain-containing protein | CWC22_RS00055 | Not Available | Positive | 13989 - 15890 | 73076.8 |
| xaa-pro dipeptidase | CWC22_RS00060 | Not Available | Positive | 16021 - 17346 | 50670.9 |
| yigz family protein | CWC22_RS00065 | Not Available | Positive | 17415 - 18032 | 21855.7 |
| trkh family potassium uptake protein | CWC22_RS00070 | Not Available | Positive | 18109 - 19560 | 52505.1 |
| hypothetical protein | CWC22_RS00075 | Not Available | Positive | 19643 - 19855 | 7778.37 |
| hypothetical protein | CWC22_RS00080 | Not Available | Positive | 20187 - 20675 | 17974.8 |
| flagellar brake protein | CWC22_RS00085 | Not Available | Positive | 20762 - 21448 | 25533.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
