Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rok family transcriptional regulator | CWC22_RS02385 | Not Available | Negative | 532721 - 533902 | 43244.4 |
| substrate-binding domain-containing protein | CWC22_RS02390 | Not Available | Positive | 534197 - 535282 | 39131.8 |
| abc transporter permease | CWC22_RS02395 | Not Available | Positive | 535291 - 536259 | 33592.7 |
| atp-binding cassette domain-containing protein | CWC22_RS02400 | Not Available | Positive | 536252 - 537025 | 27815.6 |
| glycoside hydrolase family 3 protein | CWC22_RS02405 | Not Available | Positive | 537223 - 538821 | 58235.7 |
| tonb-dependent receptor | CWC22_RS02410 | Not Available | Positive | 538988 - 541591 | 95048.7 |
| carbohydrate-binding protein | CWC22_RS02415 | Not Available | Positive | 542132 - 544306 | 77756.3 |
| immunity 49 family protein | CWC22_RS02420 | Not Available | Negative | 544394 - 545302 | 35204.4 |
| class 1 fructose-bisphosphatase | CWC22_RS02425 | Not Available | Negative | 545410 - 546378 | 35114.1 |
| zinc-dependent metalloprotease | CWC22_RS02430 | Not Available | Positive | 546538 - 548964 | 89327.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
