Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | CWC22_RS02285 | Not Available | Positive | 509019 - 509828 | 29880.3 |
| m20 family metallopeptidase | CWC22_RS02290 | Not Available | Negative | 509825 - 510955 | 40613.3 |
| rimk family alpha-l-glutamate ligase | CWC22_RS02295 | Not Available | Positive | 511145 - 512092 | 35321.8 |
| rimk family alpha-l-glutamate ligase | CWC22_RS02300 | Not Available | Positive | 512151 - 513545 | 53048.7 |
| m14 family zinc carboxypeptidase | CWC22_RS02305 | Not Available | Positive | 513621 - 516212 | 98837.8 |
| cation:proton antiporter | CWC22_RS02310 | Not Available | Positive | 516295 - 518769 | 90652.9 |
| hypothetical protein | CWC22_RS02315 | Not Available | Positive | 518852 - 519025 | 6331.7 |
| duf3299 domain-containing protein | CWC22_RS02320 | Not Available | Negative | 519085 - 519582 | 18008.8 |
| abc transporter permease | CWC22_RS02325 | Not Available | Negative | 519593 - 521089 | 54463.8 |
| abc transporter atp-binding protein | CWC22_RS02330 | Not Available | Negative | 521086 - 521772 | 24684.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
