Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metalloprotease pmba | CWC22_RS01985 | Not Available | Positive | 446753 - 448099 | 48057.9 |
| magnesium transporter | CWC22_RS01990 | Not Available | Negative | 448125 - 449483 | 49313.6 |
| hpr family phosphocarrier protein | CWC22_RS01995 | Not Available | Negative | 449662 - 449940 | 9990.8 |
| rnase adapter rapz | CWC22_RS02000 | Not Available | Negative | 449937 - 450782 | 32343.8 |
| pts sugar transporter subunit iia | CWC22_RS02005 | Not Available | Negative | 450795 - 451250 | 16638.2 |
| ribosome hibernation promoting factor | CWC22_RS02010 | Not Available | Negative | 451253 - 451540 | 11054.3 |
| rna polymerase factor sigma-54 | CWC22_RS02015 | Not Available | Negative | 451566 - 453074 | 56426.6 |
| lps export abc transporter atp-binding protein | CWC22_RS02020 | Not Available | Negative | 453119 - 453844 | 26709.5 |
| lipopolysaccharide transport periplasmic protein lpta | CWC22_RS02025 | Not Available | Negative | 453841 - 454380 | 19795.8 |
| lps export abc transporter periplasmic protein lptc | CWC22_RS02030 | Not Available | Negative | 454370 - 454924 | 20948.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
