Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sumf1/egtb/pvdo family nonheme iron enzyme | CWC22_RS01935 | Not Available | Positive | 433136 - 435166 | 75354.3 |
| rod shape-determining protein | CWC22_RS01940 | Not Available | Positive | 435307 - 436350 | 36955.9 |
| rod shape-determining protein mrec | CWC22_RS01945 | Not Available | Positive | 436350 - 437189 | 30893.7 |
| rod shape-determining protein mred | CWC22_RS01950 | Not Available | Positive | 437186 - 437662 | 18743.6 |
| maf family protein | CWC22_RS01955 | Not Available | Positive | 437662 - 438240 | 20857.8 |
| ribonuclease g | CWC22_RS01960 | Not Available | Positive | 438233 - 439705 | 55227.4 |
| yhdp family protein | CWC22_RS01965 | Not Available | Positive | 439752 - 443720 | 144851.0 |
| carbon-nitrogen hydrolase family protein | CWC22_RS01970 | Not Available | Positive | 443717 - 444541 | 30344.1 |
| metalloprotease tldd | CWC22_RS01975 | Not Available | Positive | 444534 - 445988 | 51973.4 |
| ribosome biogenesis factor yjga | CWC22_RS01980 | Not Available | Negative | 446050 - 446571 | 20023.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
