Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein n | CWC22_RS01740 | Not Available | Positive | 391633 - 392391 | 27100.6 |
| upf0149 family protein | CWC22_RS01745 | Not Available | Positive | 392395 - 392970 | 21445.0 |
| hypothetical protein | CWC22_RS01750 | Not Available | Negative | 392976 - 393179 | 7258.85 |
| hypothetical protein | CWC22_RS01755 | Not Available | Negative | 393179 - 393535 | 13340.4 |
| cytochrome c oxidase accessory protein ccog | CWC22_RS01760 | Not Available | Positive | 393769 - 395196 | 54165.2 |
| serine/threonine protein kinase | CWC22_RS01765 | Not Available | Positive | 395313 - 396287 | 37617.7 |
| thiol:disulfide interchange protein dsba/dsbl | CWC22_RS01770 | Not Available | Positive | 396307 - 396930 | 22779.6 |
| thiol:disulfide interchange protein dsba/dsbl | CWC22_RS01775 | Not Available | Positive | 396943 - 397578 | 23473.5 |
| trna (uridine(54)-c5)-methyltransferase trma | CWC22_RS01780 | Not Available | Negative | 397638 - 398735 | 42364.4 |
| duf5610 domain-containing protein | CWC22_RS01785 | Not Available | Positive | 398895 - 400007 | 40750.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
