Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system secretin gspd | CWC22_RS01690 | Not Available | Positive | 381894 - 383954 | 74817.0 |
| type ii secretion system atpase gspe | CWC22_RS01695 | Not Available | Positive | 384013 - 385500 | 55064.3 |
| type ii secretion system inner membrane protein gspf | CWC22_RS01700 | Not Available | Positive | 385500 - 386726 | 44937.8 |
| type ii secretion system major pseudopilin gspg | CWC22_RS01705 | Not Available | Positive | 386799 - 387224 | 15737.1 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | CWC22_RS01710 | Not Available | Positive | 387230 - 387850 | 23517.0 |
| type ii secretion system minor pseudopilin gspi | CWC22_RS01715 | Not Available | Positive | 387850 - 388245 | 14416.4 |
| type ii secretion system minor pseudopilin gspj | CWC22_RS01720 | Not Available | Positive | 388245 - 388970 | 27388.0 |
| type ii secretion system minor pseudopilin gspk | CWC22_RS01725 | Not Available | Positive | 388951 - 389949 | 36664.6 |
| type ii secretion system protein gspl | CWC22_RS01730 | Not Available | Positive | 389949 - 391157 | 45041.8 |
| type ii secretion system protein gspm | CWC22_RS01735 | Not Available | Positive | 391154 - 391630 | 17714.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
