Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lantibiotic dehydratase | CWC22_RS19395 | Not Available | Negative | 4543397 - 4546543 | 118864.0 |
| lanthionine synthetase c family protein | CWC22_RS19400 | Not Available | Negative | 4546554 - 4547768 | 44982.8 |
| peptidase domain-containing abc transporter | CWC22_RS19405 | Not Available | Negative | 4547951 - 4550095 | 80017.3 |
| hlyd family secretion protein | CWC22_RS19410 | Not Available | Negative | 4550126 - 4551289 | 43151.2 |
| bifunctional udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase glmu | CWC22_RS19415 | Not Available | Negative | 4551527 - 4552888 | 48098.7 |
| sensor histidine kinase | CWC22_RS19420 | Not Available | Negative | 4553044 - 4554348 | 49258.9 |
| sigma-54-dependent transcriptional regulator | CWC22_RS19425 | Not Available | Negative | 4554341 - 4555702 | 50914.3 |
| hypothetical protein | CWC22_RS19430 | Not Available | Positive | 4555821 - 4556063 | 9015.85 |
| transcriptional regulator | CWC22_RS19435 | Not Available | Positive | 4557166 - 4557654 | 18574.8 |
| abc transporter permease | CWC22_RS19440 | Not Available | Negative | 4557715 - 4560144 | 89993.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
