Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysm peptidoglycan-binding domain-containing protein | CWC22_RS19345 | Not Available | Positive | 4533192 - 4534457 | 48198.0 |
| hypothetical protein | CWC22_RS19350 | Not Available | Positive | 4534482 - 4535273 | 29764.8 |
| glycoside hydrolase family protein | CWC22_RS19355 | Not Available | Positive | 4535279 - 4535935 | 25144.3 |
| arac family transcriptional regulator | CWC22_RS19360 | Not Available | Positive | 4535923 - 4536975 | 39801.0 |
| rna 2',3'-cyclic phosphodiesterase | CWC22_RS19365 | Not Available | Negative | 4536941 - 4537471 | 19907.8 |
| helix-turn-helix domain-containing protein | CWC22_RS19370 | Not Available | Negative | 4537546 - 4538274 | 28380.9 |
| serine hydrolase domain-containing protein | CWC22_RS19375 | Not Available | Positive | 4538562 - 4539866 | 47526.7 |
| hypothetical protein | CWC22_RS19380 | Not Available | Negative | 4539800 - 4541566 | 65956.1 |
| helix-turn-helix domain-containing protein | CWC22_RS19385 | Not Available | Negative | 4541654 - 4542709 | 39220.0 |
| hypothetical protein | CWC22_RS19390 | Not Available | Negative | 4542747 - 4543289 | 20189.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
