Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CWC22_RS19000 | Not Available | Negative | 4435601 - 4436002 | 14983.9 |
| s9 family peptidase | CWC22_RS19005 | Not Available | Negative | 4436086 - 4438143 | 78290.9 |
| hypothetical protein | CWC22_RS19010 | Not Available | Negative | 4438294 - 4439139 | 31593.6 |
| efflux rnd transporter permease subunit | CWC22_RS19015 | Not Available | Negative | 4439303 - 4442458 | 116942.0 |
| efflux rnd transporter periplasmic adaptor subunit | CWC22_RS19020 | Not Available | Negative | 4442474 - 4443640 | 41975.1 |
| abc transporter permease | CWC22_RS19025 | Not Available | Negative | 4443729 - 4446122 | 87730.3 |
| abc transporter atp-binding protein | CWC22_RS19030 | Not Available | Negative | 4446137 - 4446853 | 25930.1 |
| efflux rnd transporter periplasmic adaptor subunit | CWC22_RS19035 | Not Available | Negative | 4446909 - 4448153 | 45329.9 |
| calcium-binding protein | CWC22_RS19040 | Not Available | Negative | 4448454 - 4450583 | 75765.2 |
| helix-turn-helix transcriptional regulator | CWC22_RS19045 | Not Available | Positive | 4451164 - 4451496 | 12744.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
