Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative metalloprotease cjm1_0395 family protein | CWC22_RS01640 | Not Available | Positive | 370475 - 371380 | 32745.3 |
| tex family protein | CWC22_RS01645 | Not Available | Negative | 371461 - 373797 | 85195.6 |
| transcription elongation factor greb | CWC22_RS01650 | Not Available | Negative | 373883 - 374356 | 18693.2 |
| two-component system response regulator ompr | CWC22_RS01655 | Not Available | Positive | 374577 - 375296 | 27281.0 |
| two-component system sensor histidine kinase envz | CWC22_RS01660 | Not Available | Positive | 375297 - 376646 | 50189.7 |
| hypothetical protein | CWC22_RS01665 | Not Available | Positive | 376639 - 377343 | 26060.5 |
| phosphoenolpyruvate carboxykinase | CWC22_RS01670 | Not Available | Negative | 377668 - 379206 | 56053.0 |
| hsp33 family molecular chaperone hslo | CWC22_RS01675 | Not Available | Negative | 379466 - 380311 | 31574.6 |
| ribosome-associated heat shock protein hsp15 | CWC22_RS01680 | Not Available | Negative | 380323 - 380733 | 15752.1 |
| type ii secretion system protein gspc | CWC22_RS01685 | Not Available | Positive | 380975 - 381865 | 33138.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
