Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ubiquinone biosynthesis regulatory protein kinase ubib | CWC22_RS18900 | Not Available | Positive | 4413911 - 4415521 | 61032.2 |
| sec-independent protein translocase subunit tata | CWC22_RS18905 | Not Available | Positive | 4415582 - 4415827 | 8825.62 |
| sec-independent protein translocase protein tatb | CWC22_RS18910 | Not Available | Positive | 4415834 - 4416166 | 12168.5 |
| twin-arginine translocase subunit tatc | CWC22_RS18915 | Not Available | Positive | 4416185 - 4416931 | 27505.8 |
| hypothetical protein | CWC22_RS18920 | Not Available | Positive | 4416924 - 4417391 | 17148.5 |
| tatd family hydrolase | CWC22_RS18925 | Not Available | Positive | 4417392 - 4418180 | 29362.1 |
| diguanylate cyclase | CWC22_RS18930 | Not Available | Positive | 4418180 - 4420021 | 70701.6 |
| porphobilinogen synthase | CWC22_RS18935 | Not Available | Positive | 4420023 - 4421033 | 36912.3 |
| exem/nuch family extracellular endonuclease | CWC22_RS18940 | Not Available | Positive | 4421174 - 4423909 | 97440.8 |
| hypothetical protein | CWC22_RS18945 | Not Available | Negative | 4424057 - 4424479 | 15593.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
