Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine aminotransferase | CWC22_RS18850 | Not Available | Negative | 4403634 - 4404728 | 39932.6 |
| methylthioribulose 1-phosphate dehydratase | CWC22_RS18855 | Not Available | Positive | 4404887 - 4405501 | 22486.6 |
| acireductone synthase | CWC22_RS18860 | Not Available | Positive | 4405498 - 4406184 | 25346.8 |
| 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase | CWC22_RS18865 | Not Available | Positive | 4406181 - 4406723 | 20714.1 |
| s-methyl-5-thioribose-1-phosphate isomerase | CWC22_RS18870 | Not Available | Negative | 4406747 - 4407769 | 36743.1 |
| s-methyl-5-thioribose kinase | CWC22_RS18875 | Not Available | Positive | 4408023 - 4409225 | 45122.4 |
| duf885 domain-containing protein | CWC22_RS18880 | Not Available | Negative | 4409284 - 4411044 | 66736.4 |
| ggdef domain-containing protein | CWC22_RS18885 | Not Available | Positive | 4411365 - 4412372 | 38382.9 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | CWC22_RS18890 | Not Available | Positive | 4412504 - 4413259 | 28077.7 |
| scp2 domain-containing protein | CWC22_RS18895 | Not Available | Positive | 4413283 - 4413900 | 22881.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
