Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa carboxylase biotin carboxylase subunit | CWC22_RS17905 | Not Available | Positive | 4173094 - 4174434 | 48988.9 |
| dmt family transporter | CWC22_RS17910 | Not Available | Positive | 4174606 - 4175499 | 32055.2 |
| duf2489 domain-containing protein | CWC22_RS17915 | Not Available | Negative | 4175511 - 4176017 | 19634.8 |
| der gtpase-activating protein yihi | CWC22_RS17920 | Not Available | Negative | 4176021 - 4176596 | 21915.0 |
| class i sam-dependent methyltransferase | CWC22_RS17925 | Not Available | Negative | 4176619 - 4177269 | 24696.5 |
| c-type cytochrome | CWC22_RS17930 | Not Available | Negative | 4177918 - 4178550 | 22343.8 |
| ribosome biogenesis gtp-binding protein yiha/ysxc | CWC22_RS17935 | Not Available | Positive | 4178921 - 4179565 | 23763.8 |
| duf1285 domain-containing protein | CWC22_RS17940 | Not Available | Negative | 4179600 - 4180130 | 19583.3 |
| ycei family protein | CWC22_RS17945 | Not Available | Negative | 4180123 - 4180686 | 20284.9 |
| dna polymerase i | CWC22_RS17950 | Not Available | Negative | 4181135 - 4183888 | 102335.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
