Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dmt family transporter | CWC22_RS17755 | Not Available | Positive | 4141904 - 4142767 | 30931.8 |
| glycerophosphodiester phosphodiesterase | CWC22_RS17760 | Not Available | Positive | 4142764 - 4143486 | 27111.3 |
| methyl-accepting chemotaxis protein | CWC22_RS17765 | Not Available | Positive | 4143607 - 4144824 | 45519.4 |
| elongation factor p--(r)-beta-lysine ligase | CWC22_RS17770 | Not Available | Negative | 4144845 - 4145843 | 36524.5 |
| elongation factor p | CWC22_RS17775 | Not Available | Negative | 4145948 - 4146514 | 20506.4 |
| ef-p beta-lysylation protein epmb | CWC22_RS17780 | Not Available | Positive | 4146556 - 4147575 | 38255.5 |
| hypothetical protein | CWC22_RS17785 | Not Available | Negative | 4147631 - 4147828 | 6483.67 |
| prephenate dehydrogenase | CWC22_RS17790 | Not Available | Positive | 4147901 - 4148194 | 11022.3 |
| duf3016 domain-containing protein | CWC22_RS17795 | Not Available | Negative | 4148222 - 4148707 | 18419.1 |
| efflux rnd transporter permease subunit | CWC22_RS17800 | Not Available | Negative | 4148867 - 4151923 | 112064.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
