Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | CWC22_RS17555 | Not Available | Negative | 4094142 - 4095467 | 47007.8 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | CWC22_RS17560 | Not Available | Negative | 4095490 - 4096572 | 39465.3 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | CWC22_RS17565 | Not Available | Negative | 4096566 - 4097969 | 50694.6 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | CWC22_RS17570 | Not Available | Negative | 4097966 - 4099444 | 52918.0 |
| penicillin-binding transpeptidase domain-containing protein | CWC22_RS17575 | Not Available | Negative | 4099434 - 4101248 | 66540.8 |
| cell division protein ftsl | CWC22_RS17580 | Not Available | Negative | 4101245 - 4101565 | 12582.5 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | CWC22_RS17585 | Not Available | Negative | 4101565 - 4102500 | 34431.4 |
| division/cell wall cluster transcriptional repressor mraz | CWC22_RS17590 | Not Available | Negative | 4102522 - 4102980 | 17707.2 |
| eal domain-containing protein | CWC22_RS17595 | Not Available | Positive | 4103425 - 4106418 | 112190.0 |
| hypothetical protein | CWC22_RS17600 | Not Available | Negative | 4106470 - 4106607 | 5035.43 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
