Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s ribosomal rna | Not Available | Not Available | Positive | 340655 - 343534 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 343651 - 343765 | Not Available |
| transcriptional repressor lexa | CWC22_RS01500 | Not Available | Positive | 344201 - 344809 | 22202.9 |
| cytochrome c oxidase subunit ii | CWC22_RS01505 | Not Available | Positive | 345141 - 346253 | 41334.8 |
| cytochrome c oxidase subunit i | CWC22_RS01510 | Not Available | Positive | 346250 - 347842 | 58955.0 |
| udp-glucose 6-dehydrogenase | CWC22_RS01515 | Not Available | Positive | 347839 - 348354 | 18947.0 |
| cytochrome c oxidase subunit 3 | CWC22_RS01520 | Not Available | Positive | 348482 - 349345 | 32142.4 |
| duf2909 domain-containing protein | CWC22_RS01525 | Not Available | Negative | 349340 - 349552 | 7853.25 |
| surf1 family protein | CWC22_RS01530 | Not Available | Positive | 349615 - 350289 | 25241.1 |
| transmembrane cytochrome oxidase associated protein | CWC22_RS01535 | Not Available | Positive | 350282 - 350779 | 18082.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
