Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-o)- methyltransferase trml | CWC22_RS17255 | Not Available | Positive | 4018332 - 4018796 | 17765.2 |
| ribosome hibernation-promoting factor, hpf/yfia family | CWC22_RS17260 | Not Available | Negative | 4018843 - 4019199 | 13226.0 |
| yjbh domain-containing protein | CWC22_RS17265 | Not Available | Negative | 4019410 - 4021524 | 78628.7 |
| polysaccharide biosynthesis protein | CWC22_RS17270 | Not Available | Negative | 4021721 - 4023667 | 71303.7 |
| nad-dependent epimerase | CWC22_RS17275 | Not Available | Negative | 4023993 - 4025000 | 37501.1 |
| nucleotide sugar dehydrogenase | CWC22_RS17280 | Not Available | Negative | 4025013 - 4026179 | 42998.2 |
| polysaccharide biosynthesis protein | CWC22_RS17285 | Not Available | Negative | 4026232 - 4028172 | 71015.2 |
| udp-n-acetylglucosamine 2-epimerase | CWC22_RS17290 | Not Available | Negative | 4029164 - 4030357 | 43666.4 |
| asparagine synthase (glutamine-hydrolyzing) | CWC22_RS17295 | Not Available | Negative | 4030357 - 4032114 | 67345.9 |
| sugar transferase | CWC22_RS17300 | Not Available | Negative | 4032117 - 4032668 | 20494.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
