Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system f family protein | CWC22_RS17205 | Not Available | Positive | 4008602 - 4009834 | 44524.0 |
| prepilin peptidase | CWC22_RS17210 | Not Available | Positive | 4009857 - 4010732 | 32303.4 |
| dephospho-coa kinase | CWC22_RS17215 | Not Available | Positive | 4010737 - 4011348 | 22399.9 |
| type iv-a pilus assembly atpase pilb | CWC22_RS17220 | Not Available | Positive | 4011457 - 4013133 | 62268.9 |
| dna gyrase inhibitor yacg | CWC22_RS17225 | Not Available | Positive | 4013205 - 4013447 | 8915.47 |
| spy/cpxp family protein refolding chaperone | CWC22_RS17230 | Not Available | Negative | 4013494 - 4014003 | 19365.5 |
| response regulator transcription factor | CWC22_RS17235 | Not Available | Positive | 4014212 - 4014898 | 25474.0 |
| atp-binding protein | CWC22_RS17240 | Not Available | Positive | 4014900 - 4016279 | 52150.4 |
| alpha/beta fold hydrolase | CWC22_RS17245 | Not Available | Positive | 4016269 - 4017249 | 36425.5 |
| cation diffusion facilitator family transporter | CWC22_RS17250 | Not Available | Negative | 4017242 - 4018084 | 30565.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
