Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobalamin biosynthesis protein | CWC22_RS17155 | Not Available | Positive | 3996478 - 3997428 | 36084.7 |
| tyrosine--trna ligase | CWC22_RS17160 | Not Available | Negative | 3997484 - 3998683 | 44399.7 |
| peptidoglycan dd-metalloendopeptidase family protein | CWC22_RS17165 | Not Available | Positive | 3998846 - 4000183 | 49543.4 |
| duf945 domain-containing protein | CWC22_RS17170 | Not Available | Negative | 4000246 - 4001163 | 32887.0 |
| dna repair protein rada | CWC22_RS17175 | Not Available | Negative | 4001177 - 4002547 | 48899.5 |
| pilz domain-containing protein | CWC22_RS17180 | Not Available | Positive | 4002684 - 4005185 | 95756.9 |
| beta-lactamase regulator ampe | CWC22_RS17185 | Not Available | Negative | 4005226 - 4006110 | 33813.6 |
| 1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampd | CWC22_RS17190 | Not Available | Negative | 4006122 - 4006658 | 19995.6 |
| carboxylating nicotinate-nucleotide diphosphorylase | CWC22_RS17195 | Not Available | Positive | 4006848 - 4007687 | 29996.9 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | CWC22_RS24600 | Not Available | Positive | 4008085 - 4008552 | 15781.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
