Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dead/deah box helicase | CWC22_RS16945 | Not Available | Negative | 3954324 - 3956159 | 67969.3 |
| hnh endonuclease | CWC22_RS16950 | Not Available | Negative | 3956156 - 3956971 | 30381.3 |
| atp-binding protein | CWC22_RS16955 | Not Available | Negative | 3956980 - 3958620 | 61398.1 |
| is3 family transposase | CWC22_RS16960 | Not Available | Negative | 3958859 - 3960021 | 44982.7 |
| dna (cytosine-5-)-methyltransferase | CWC22_RS16970 | Not Available | Negative | 3960944 - 3962635 | 64824.6 |
| type ii restriction endonuclease | CWC22_RS16975 | Not Available | Negative | 3962711 - 3963937 | 46610.2 |
| very short patch repair endonuclease | CWC22_RS16980 | Not Available | Negative | 3963995 - 3964459 | 17928.2 |
| hypothetical protein | CWC22_RS16990 | Not Available | Negative | 3965248 - 3965784 | 20871.1 |
| helix-turn-helix transcriptional regulator | CWC22_RS16995 | Not Available | Negative | 3965788 - 3966087 | 11708.8 |
| merr family transcriptional regulator | CWC22_RS17000 | Not Available | Positive | 3966397 - 3967569 | 43989.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
