Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | CWC22_RS16890 | Not Available | Negative | 3944040 - 3944807 | 27931.2 |
| abc transporter atp-binding protein | CWC22_RS16895 | Not Available | Negative | 3944810 - 3945730 | 33886.0 |
| flavin prenyltransferase ubix | CWC22_RS16900 | Not Available | Negative | 3945856 - 3946473 | 22147.9 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | CWC22_RS16905 | Not Available | Negative | 3946478 - 3947827 | 48998.7 |
| orotate phosphoribosyltransferase | CWC22_RS16910 | Not Available | Negative | 3948020 - 3948664 | 23528.1 |
| ribonuclease ph | CWC22_RS16915 | Not Available | Negative | 3948690 - 3949403 | 25676.9 |
| yicc/yloc family endoribonuclease | CWC22_RS16920 | Not Available | Positive | 3949629 - 3950489 | 32804.4 |
| tyrosine-type recombinase/integrase | CWC22_RS16925 | Not Available | Positive | 3950582 - 3951856 | 48170.9 |
| tyrosine-type recombinase/integrase | CWC22_RS16930 | Not Available | Positive | 3952551 - 3953384 | 31872.9 |
| ecorii n-terminal effector-binding domain-containing protein | CWC22_RS16940 | Not Available | Negative | 3953887 - 3954327 | 16768.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
