Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| erythrose-4-phosphate dehydrogenase | CWC22_RS16840 | Not Available | Negative | 3928648 - 3929661 | 37035.1 |
| 3'-5' exonuclease | CWC22_RS16845 | Not Available | Negative | 3929819 - 3930436 | 23042.9 |
| duf294 nucleotidyltransferase-like domain-containing protein | CWC22_RS16850 | Not Available | Negative | 3930433 - 3932271 | 69673.7 |
| sodium:solute symporter family protein | CWC22_RS16855 | Not Available | Negative | 3932368 - 3934092 | 61037.0 |
| duf4212 domain-containing protein | CWC22_RS16860 | Not Available | Negative | 3934104 - 3934367 | 10115.5 |
| pas-domain containing protein | CWC22_RS16865 | Not Available | Positive | 3934735 - 3938163 | 126902.0 |
| sensor domain-containing diguanylate cyclase | CWC22_RS16870 | Not Available | Negative | 3938194 - 3939228 | 39367.5 |
| pyridoxal-dependent aspartate 1-decarboxylase panp | CWC22_RS16875 | Not Available | Negative | 3939375 - 3941003 | 59814.4 |
| ggdef domain-containing protein | CWC22_RS16880 | Not Available | Positive | 3941318 - 3943216 | 71873.6 |
| trna (guanine(46)-n(7))-methyltransferase trmb | CWC22_RS16885 | Not Available | Negative | 3943253 - 3943918 | 25121.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
