Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vwa domain-containing protein | CWC22_RS16590 | Not Available | Positive | 3871911 - 3873095 | 45276.8 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 3873919 - 3874033 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 3874150 - 3877029 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 3877301 - 3878833 | Not Available |
| porin | CWC22_RS16610 | Not Available | Negative | 3879444 - 3880373 | 33387.6 |
| lysr family transcriptional regulator | CWC22_RS16615 | Not Available | Negative | 3880516 - 3881364 | 31757.5 |
| duf413 domain-containing protein | CWC22_RS16620 | Not Available | Positive | 3881451 - 3881828 | 14441.0 |
| eama family transporter rard | CWC22_RS16625 | Not Available | Negative | 3881871 - 3882776 | 33481.9 |
| dna helicase recq | CWC22_RS16630 | Not Available | Positive | 3882926 - 3884740 | 68347.8 |
| duf3630 family protein | CWC22_RS16635 | Not Available | Positive | 3884765 - 3885067 | 11617.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
