Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | CWC22_RS16540 | Not Available | Negative | 3865550 - 3866188 | 23499.6 |
| 5'/3'-nucleotidase sure | CWC22_RS16545 | Not Available | Negative | 3866194 - 3866943 | 26766.9 |
| trna pseudouridine(13) synthase trud | CWC22_RS16550 | Not Available | Negative | 3866924 - 3867988 | 40013.9 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | CWC22_RS16555 | Not Available | Negative | 3867990 - 3868469 | 17033.6 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | CWC22_RS16560 | Not Available | Negative | 3868466 - 3869167 | 25390.3 |
| cell division protein ftsb | CWC22_RS16565 | Not Available | Negative | 3869160 - 3869444 | 11000.3 |
| hypothetical protein | CWC22_RS16570 | Not Available | Negative | 3869498 - 3870145 | 24639.4 |
| duf2947 domain-containing protein | CWC22_RS16575 | Not Available | Negative | 3870238 - 3870720 | 18805.1 |
| duf1653 domain-containing protein | CWC22_RS16580 | Not Available | Positive | 3870775 - 3870999 | 8700.3 |
| aaa family atpase | CWC22_RS16585 | Not Available | Positive | 3871075 - 3871908 | 31535.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
