Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CWC22_RS16440 | Not Available | Positive | 3836651 - 3837103 | 16269.4 |
| esterase/lipase family protein | CWC22_RS16445 | Not Available | Positive | 3837565 - 3838989 | 52651.8 |
| tonb-dependent receptor | CWC22_RS16450 | Not Available | Positive | 3839205 - 3841397 | 81875.0 |
| hypothetical protein | CWC22_RS16455 | Not Available | Positive | 3841627 - 3842046 | 15788.7 |
| sensor histidine kinase | CWC22_RS16460 | Not Available | Negative | 3842299 - 3843630 | 48597.2 |
| sigma-54-dependent transcriptional regulator | CWC22_RS16465 | Not Available | Negative | 3843640 - 3845040 | 50889.0 |
| efflux rnd transporter periplasmic adaptor subunit | CWC22_RS16470 | Not Available | Positive | 3845274 - 3846521 | 46461.5 |
| abc transporter atp-binding protein | CWC22_RS16475 | Not Available | Positive | 3846555 - 3847247 | 25283.4 |
| abc transporter permease | CWC22_RS16480 | Not Available | Positive | 3847278 - 3849689 | 87723.9 |
| mbl fold metallo-hydrolase | CWC22_RS16485 | Not Available | Negative | 3849750 - 3851381 | 60677.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
