Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | CWC22_RS16390 | Not Available | Negative | 3825041 - 3825460 | 15586.4 |
| abc transporter permease | CWC22_RS16395 | Not Available | Negative | 3825533 - 3828043 | 91804.4 |
| abc transporter atp-binding protein | CWC22_RS16400 | Not Available | Negative | 3828070 - 3828801 | 26281.2 |
| hlyd family secretion protein | CWC22_RS16405 | Not Available | Negative | 3828827 - 3830104 | 46952.7 |
| response regulator transcription factor | CWC22_RS16410 | Not Available | Positive | 3830281 - 3830970 | 25779.0 |
| sensor histidine kinase | CWC22_RS16415 | Not Available | Positive | 3830981 - 3832828 | 70118.5 |
| mipa/ompv family protein | CWC22_RS16420 | Not Available | Positive | 3833044 - 3833901 | 31385.8 |
| duf3019 domain-containing protein | CWC22_RS16425 | Not Available | Positive | 3833912 - 3834298 | 14748.7 |
| winged helix-turn-helix domain-containing protein | CWC22_RS16430 | Not Available | Positive | 3834298 - 3835017 | 27065.6 |
| sensor histidine kinase | CWC22_RS16435 | Not Available | Positive | 3835017 - 3836285 | 47589.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
