Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eal domain-containing protein | CWC22_RS16340 | Not Available | Positive | 3812143 - 3812886 | 27655.4 |
| pas domain-containing protein | CWC22_RS16345 | Not Available | Positive | 3812912 - 3815611 | 102227.0 |
| m23 family metallopeptidase | CWC22_RS16350 | Not Available | Positive | 3816029 - 3817216 | 43970.9 |
| helix-turn-helix transcriptional regulator | CWC22_RS16355 | Not Available | Positive | 3817478 - 3818176 | 25879.1 |
| csgg/hfab family protein | CWC22_RS16360 | Not Available | Negative | 3818173 - 3818955 | 28606.6 |
| curli assembly protein csgf | CWC22_RS16365 | Not Available | Negative | 3818955 - 3819371 | 15267.1 |
| curli production assembly/transport protein csge | CWC22_RS16370 | Not Available | Negative | 3819374 - 3819766 | 14411.4 |
| curlin | CWC22_RS16375 | Not Available | Negative | 3819814 - 3821334 | 52922.4 |
| s8 family serine peptidase | CWC22_RS16380 | Not Available | Positive | 3822045 - 3824546 | 86792.3 |
| hypothetical protein | CWC22_RS16385 | Not Available | Negative | 3824675 - 3824962 | 10695.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
