Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein assembly factor bamb | CWC22_RS16290 | Not Available | Negative | 3801049 - 3802224 | 42760.0 |
| yfgm family protein | CWC22_RS16295 | Not Available | Negative | 3802234 - 3802851 | 21840.5 |
| histidine--trna ligase | CWC22_RS16300 | Not Available | Negative | 3802926 - 3804203 | 47764.0 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | CWC22_RS16305 | Not Available | Negative | 3804337 - 3805455 | 40537.8 |
| rodz domain-containing protein | CWC22_RS16310 | Not Available | Negative | 3805461 - 3806429 | 35395.2 |
| type iv pilus biogenesis/stability protein pilw | CWC22_RS16315 | Not Available | Negative | 3806426 - 3808117 | 62816.2 |
| bifunctional trna (adenosine(37)-c2)-methyltransferase trmg/ribosomal rna large subunit methyltransferase rlmn | CWC22_RS16320 | Not Available | Negative | 3808253 - 3809383 | 41855.6 |
| nucleoside-diphosphate kinase | CWC22_RS16325 | Not Available | Negative | 3809572 - 3810003 | 15738.6 |
| trna 5-hydroxyuridine modification protein yegq | CWC22_RS16330 | Not Available | Positive | 3810325 - 3811683 | 50929.8 |
| yfhl family 4fe-4s dicluster ferredoxin | CWC22_RS16335 | Not Available | Positive | 3811708 - 3811959 | 9284.17 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
