Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CWC22_RS15480 | Not Available | Negative | 3562304 - 3562960 | 25069.4 |
| hypothetical protein | CWC22_RS15485 | Not Available | Negative | 3563187 - 3563756 | 20667.7 |
| helix-turn-helix domain-containing protein | CWC22_RS15490 | Not Available | Positive | 3564022 - 3564252 | 8472.34 |
| dead/deah box helicase | CWC22_RS15495 | Not Available | Positive | 3564375 - 3565775 | 51427.2 |
| atp-dependent rna helicase dbpa | CWC22_RS15500 | Not Available | Positive | 3565893 - 3567284 | 51013.8 |
| type b 50s ribosomal protein l31 | CWC22_RS15505 | Not Available | Positive | 3567448 - 3567705 | 9588.33 |
| type b 50s ribosomal protein l36 | CWC22_RS15510 | Not Available | Positive | 3567711 - 3567848 | 5160.59 |
| exbd/tolr family protein | CWC22_RS15515 | Not Available | Positive | 3568164 - 3568568 | 14529.5 |
| substrate-binding periplasmic protein | CWC22_RS15520 | Not Available | Negative | 3568604 - 3569362 | 28512.5 |
| hypothetical protein | CWC22_RS15525 | Not Available | Negative | 3569465 - 3569851 | 14373.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
