Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilw family protein | CWC22_RS01290 | Not Available | Positive | 297625 - 298149 | 18579.6 |
| type ii secretion system protein j | CWC22_RS01295 | Not Available | Positive | 298154 - 299896 | 61740.9 |
| rna polymerase sigma factor | CWC22_RS01300 | Not Available | Positive | 300050 - 300601 | 21292.5 |
| hypothetical protein | CWC22_RS01305 | Not Available | Positive | 300594 - 301079 | 18404.2 |
| duf4097 family beta strand repeat-containing protein | CWC22_RS01310 | Not Available | Positive | 301089 - 302030 | 34425.6 |
| replicative dna helicase | CWC22_RS01315 | Not Available | Positive | 302149 - 303528 | 50937.7 |
| alanine racemase | CWC22_RS01320 | Not Available | Positive | 303577 - 304674 | 39996.4 |
| secondary thiamine-phosphate synthase enzyme yjbq | CWC22_RS01325 | Not Available | Negative | 304675 - 305106 | 16401.4 |
| chemotaxis protein chex | CWC22_RS01330 | Not Available | Negative | 305103 - 305570 | 16709.3 |
| transcriptional repressor | CWC22_RS01335 | Not Available | Negative | 305643 - 306077 | 15987.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
