Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium ion-translocating decarboxylase subunit beta | CWC22_RS14980 | Not Available | Negative | 3447812 - 3448945 | 39047.0 |
| sodium-extruding oxaloacetate decarboxylase subunit alpha | CWC22_RS14985 | Not Available | Negative | 3448956 - 3450731 | 64658.6 |
| oadg family protein | CWC22_RS14990 | Not Available | Negative | 3450747 - 3451010 | 9174.19 |
| ycxb family protein | CWC22_RS14995 | Not Available | Positive | 3451440 - 3451916 | 17992.8 |
| carbon storage regulator csra | CWC22_RS15000 | Not Available | Negative | 3451965 - 3452156 | 6967.59 |
| aspartate kinase | CWC22_RS15005 | Not Available | Negative | 3452247 - 3453467 | 43920.0 |
| alanine--trna ligase | CWC22_RS15010 | Not Available | Negative | 3453471 - 3456074 | 94189.7 |
| regulatory protein recx | CWC22_RS15015 | Not Available | Negative | 3456113 - 3456580 | 18641.2 |
| bpss1780 family membrane protein | CWC22_RS15020 | Not Available | Negative | 3456580 - 3457374 | 29172.7 |
| gtp cyclohydrolase ii | CWC22_RS15025 | Not Available | Negative | 3457526 - 3458158 | 23425.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
